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MATLAB code for Lp-Adaptation: Design Centering and Volume Approximation
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Image-based pipeline for solving inhomogeneous reaction-diffusion PDEs in real-world porous geometries. Level-set method (multi-CPU) for reconstruction. Sparse grids (multi-GPU) for diffusion simulation. Parallel data structures from OpenFPM.
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This repository contains the image analysis pipelines for bile canaliculi analysis and mesenchyme counting associated with the paper "Mouse liver assembloids model periportal architecture and biliary fibrosis"
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Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)
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MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.
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