Explore projects

pSSAlib: Stochastic chemical network and reaction-diffusion simulation

MATLAB code for deconvolving snakes

Theory analysis and code for studying Drosophila wing disc eversion

Hexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.

Jenkins pipelines

Official MOSAIC Group software repository.

A MATLAB implementation of the split-Bregman algorithm for image segmentation

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

Particle filter tracking toolkit/framework for the popular free image processing software ImageJ.

MATLAB implementation of image naturalization

PPM client for diffusion on curved surfaces

Complementary information concerning the article: "The novel Rab5 effector FERRY links the early endosome with the translation machinery"

R utilities for data analysis and bioinformatics