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Scientific Computing / bioimage_team / IACourse_2020-12
Creative Commons Attribution Non Commercial 4.0 International3day Image analysis course given externally in 2020-12.
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steinbac / ngs_tools
BSD 3-Clause "New" or "Revised" LicenseA collection of tools to process and manipulate high-throughput sequencing data
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Veenvliet Lab / organoid_prediction_python
BSD 3-Clause "New" or "Revised" Licenseuseful functionality for image-, data-analysis and classification of stembryos
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bioinfo / datautils
BSD 2-Clause "Simplified" LicenseR utilities for data analysis and bioinformatics
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Scientific Computing / bioimage_team / Intro_ImageAnalysis_2021-05
Creative Commons Attribution Non Commercial 4.0 InternationalImage analysis course (20h): Concepts and hands-on with Fiji and Ilastik.
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Complementary information concerning the article: "A 3D system to model human pancreas development and its reference single cell transcriptome atlas reveal signaling pathways required for progenitor expansion"
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rhaase / NEUBIAS_TS12
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
Huch lab / prior_et_al_2019
MIT LicenseSupplementary Jupyter notebook to our article "Lgr5+ stem/progenitor cells reside at the apex of the embryonic hepatoblast pool"
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Sbalzarini Lab / Software / Parallel Computing / PPM / ppmnumerics
GNU General Public License v3.0 onlyUpdated -
rhaase / clij_mtz_2020
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
Mateus_Group / Guanine_crystal_analysis_APOC
BSD 3-Clause "New" or "Revised" LicenseRepository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"
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This repository contains source codes and notebook demos for trainin STENCIL-NET.
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rhaase / clij_neubias_2020
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
Scientific Computing / Schuhmacher et al 2020. Live cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities.
BSD 3-Clause "New" or "Revised" LicenseLive cell lipid biochemistry reveals a role of diacylglycerol side chain composition for cellular lipid dynamics and protein affinities
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MATLAB implementation of image naturalization
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