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pSSAlib: Stochastic chemical network and reaction-diffusion simulation

A test repository for teaching

MATLAB Toolbox for cell-outline segmentation in phase-contrast images

MATLAB code for deconvolving snakes

A web service for calculating the Levenshtein distance between two sequences

Supplementary Jupyter notebook to our article "Lgr5+ stem/progenitor cells reside at the apex of the embryonic hepatoblast pool"

Theory analysis and code for studying Drosophila wing disc eversion

This repository contains source codes and notebook demos for trainin STENCIL-NET.

Slicing lc ms data into time ... slices, to run lipidxplorer on the slices

Quantitative analysis of diacylglycerol signaling kinetics in single cells

Sequencing analysis pipeline for our paper "Human assembloids recapitulate periportal liver tissue in vitro"

Exact stochastic simulation of intracellular transport