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This repository contains the image analysis pipelines for bile canaliculi analysis and mesenchyme counting associated with the paper "Mouse liver assembloids model periportal architecture and biliary fibrosis"

Setting up a python3 installation to run standalone... or with your code

Complementary information concerning the article "Mutations in the Drosophila splicing regulator Prp31 as a model for Retinitis pigmentosa 11"

This software package implements the identification of robust topological defects.

hyrdrodynamics methods for kirchhoff graphs

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.

pSSAlib: Stochastic chemical network and reaction-diffusion simulation

Repository containing the scripts used in Iglesias-Artola et al 2024. Quantitative imaging of species-specific lipid transport in mammalian cells