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This is a code-repository for the image-, sequencing and data-analysis performed for the manuscript: Integrated Molecular-Phenotypic Profiling Reveals Tuneable Modulators of Morphological Variation in Stembryos" authored by: Alba Villaronga Luque et al.

useful functionality for image-, data-analysis and classification of stembryos

Python Scripts to generate data in MongoDB after aggregation from source databases; update/modify data for the web app as well as the predictor; manipulate data for "Condensate Proteome Predictor"

Repository containing the scripts used in Iglesias-Artola et al 2024. Quantitative imaging of species-specific lipid transport in mammalian cells

repo to contain example notebooks to run DeepContrast

Code repository for various misc plk scripts.

private repo with testing jupyter notebooks

MotionTracking project to Analyze Hepatocyte Cages.

Theory analysis and code for studying Drosophila wing disc eversion

Data and code for "impossible ecologies" paper