Explore projects
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argupta / openfpm_data
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Setting up a python3 installation to run standalone... or with your code
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A MATLAB implementation of the split-Bregman algorithm for image segmentation
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Official MOSAIC Group software repository.
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Veenvliet Lab / Integrated_Molecular-Phenotypic_Profiling_of_Stembryos
BSD 3-Clause "New" or "Revised" LicenseThis is a code-repository for the image-, sequencing and data-analysis performed for the manuscript: Integrated Molecular-Phenotypic Profiling Reveals Tuneable Modulators of Morphological Variation in Stembryos" authored by: Alba Villaronga Luque et al.
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Sbalzarini Lab / LpAdaptation python
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labShevchenko / PeakStrainer
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Huch lab / Image Analysis Pipelines - Mouse liver assembloids model periportal architecture and biliary fibrosis
BSD 3-Clause "New" or "Revised" LicenseThis repository contains the image analysis pipelines for bile canaliculi analysis and mesenchyme counting associated with the paper "Mouse liver assembloids model periportal architecture and biliary fibrosis"
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MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.
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Scientific Computing / bioimage_team / deconvolution_documentation
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
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walker / cellpose_explore
BSD 3-Clause "New" or "Revised" LicenseExploring cellpose (deep learning) for segmentation in 2D&3D. Including setup for GPU on cluster or workstation
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MSS trajectory analysis
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