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This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.

Geometric computation benchmarks with classic numerical schemes for comparison with Global Polynomial Level Set method.

Setting up a python3 installation to run standalone... or with your code

Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.

useful functionality for image-, data-analysis and classification of stembryos

Project to quantify and measure orientation of network branches in regards to Ch iMap

MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.

PPM client for diffusion in complex spaces

Exploring cellpose (deep learning) for segmentation in 2D&3D. Including setup for GPU on cluster or workstation