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Hexagonal spring network with pores are stretched. The resulting stress profile is analyzed. The aim is to verify the hypothesis that in the Zebrafish optic cup, ECM with more pores are under more stress than ECM with less pores.

PDE inference from limited spatio-temporal data

polishing pipelines

real-time in-situ visualization of distributed numerical simulations

Jenkins pipelines

Code accompanying "Inverse-Dirichlet Weighting Enables Reliable Training of Physics Informed Neural Networks", Maddu et al., 2021

This repository contains source codes and notebook demos for trainin STENCIL-NET.

Library for producing and processing on the Adaptive Particle Representation (APR)

Python wrappers for LibAPR

Scenery - Virtual Reality and Augmented Reality framework

Small scripts and bits for data processing interoperability with the cluster

This is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.

Interaction Analysis Toolbox for MATLAB

Region Competition algorithm implemented as an ITK filter (C++).