Commits · cfe035b80c9ed263ad239ae052ebbf0e0d360e10 · Huch lab / docker / bulkseq · GitLab

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Feb 16, 2025
- fix typo in library name from 'biomart' to 'biomaRt' in test_R.R · cfe035b8
  rost authored 3 months ago
  
  cfe035b8
- update Dockerfile to use the latest R notebook image · ab5ae29e
  rost authored 3 months ago
  
  ab5ae29e
- add missing libraries and sessionInfo to test_R.R · c7daf25e
  rost authored 3 months ago
  
  c7daf25e
- update README to correct Docker image version format · 444bd4be
  rost authored 3 months ago
  
  444bd4be
Feb 14, 2025
- fix quarto installation method in Dockerfile to use curl for downloading · 91ac14ec
  rost authored 3 months ago
  
  91ac14ec
- fix quarto installation method in Dockerfile · b7cb3647
  rost authored 3 months ago
  
  b7cb3647
- add quarto installation to Dockerfile · bd3ce80b
  rost authored 3 months ago
  
  bd3ce80b
- add mscorefonts · efb2280f
  rost authored 3 months ago
  
  View commits for tag v0.0.2 v0.0.2
  
  efb2280f
- fix ashr which is 'r-ashr' · a1ed4015
  rost authored 3 months ago
  
  a1ed4015
- add bioconductor-ashr · 9428ae37
  rost authored 3 months ago
  
  9428ae37
- add bioconductor-apeglm · e1bb3e6c
  rost authored 3 months ago
  
  e1bb3e6c
Feb 13, 2025
- add bioconductor-biomart · c2be153d
  rost authored 3 months ago
  
  c2be153d
Feb 12, 2025
- Add LICENSE file and update README to include licensing information · d8013f91
  rost authored 3 months ago
  
  d8013f91
- Update shebang in test_R.R to use Rscript for improved compatibility · d6291346
  rost authored 3 months ago
  
  d6291346
- Update CI configuration to use variable for container image in test scripts · 5d007b87
  rost authored 3 months ago
  
  5d007b87
- Update shebang in test_R.R to use conda R path · 31fab8d1
  rost authored 3 months ago
  
  31fab8d1
- Add R testing stage to CI pipeline and create test script for package loading · 77591efe
  rost authored 3 months ago
  
  77591efe
- Update Dockerfile to include languageserver package and reorder installation · a84c9b8e
  rost authored 3 months ago
  
  a84c9b8e
- Update README with new Docker image paths for bulkseq container · 7ec5d7bf
  rost authored 3 months ago
  
  View commits for tag v0.0.1 v0.0.1
  
  7ec5d7bf
- Update README to reflect new repository name and enhance usage instructions... · 93c664b4
  rost authored 3 months ago
  
  Update README to reflect new repository name and enhance usage instructions for bulkseq Docker container
  93c664b4
- Update Dockerfile to use Jupyter R Notebook image and restore package installation steps · 5da510f6
  rost authored 3 months ago
  
  5da510f6
- Add pipeline and release badges to README · 4b7b80b3
  rost authored 3 months ago
  
  4b7b80b3
- Remove redundant Docker image and service configurations from build, test, and push stages in CI · ab9c740e
  rost authored 3 months ago
  
  ab9c740e
- Add Docker-in-Docker service configuration for test environment · 3b85c4cd
  rost authored 3 months ago
  
  3b85c4cd
- Add Docker image specification for test environment in CI configuration · 0f1832bc
  rost authored 3 months ago
  
  0f1832bc
- Restore Docker image and service configuration in CI push stage · 11704a77
  rost authored 3 months ago
  
  11704a77
- Refactor CI configuration to set default tags for Docker jobs and remove... · 18b68a5e
  rost authored 3 months ago
  
  Refactor CI configuration to set default tags for Docker jobs and remove redundant tags from build, push, and release stages
  18b68a5e
- Toggle Docker image and service configuration in CI build and push stages · 6f647f34
  rost authored 3 months ago
  
  6f647f34
- Remove Docker image and service configuration from CI build stage · 851715cd
  rost authored 3 months ago
  
  851715cd
- Add test stage and environment variable validation script to CI configuration · 5081cd0e
  rost authored 3 months ago
  
  5081cd0e
- Change base image from Alpine to Ubuntu for improved compatibility and package management · 79b3770d
  rost authored 3 months ago
  
  79b3770d
- Set default shell to bash in Dockerfile for improved script execution · af8f4f9d
  rost authored 3 months ago
  
  af8f4f9d
- Add bash to Dockerfile for improved script compatibility · 85e47d67
  rost authored 3 months ago
  
  85e47d67
- Add Docker tag to release job in CI configuration · af61ece8
  rost authored 3 months ago
  
  af61ece8
- Install git in CI configuration to capture commit information during Docker build · 40066f41
  rost authored 3 months ago
  
  40066f41
- Refactor CI configuration to consolidate Docker setup in build and push stages · ab3851c6
  rost authored 3 months ago
  
  ab3851c6
- Fix typo in CI configuration by correcting 'relase' to 'release' · 043c274e
  rost authored 3 months ago
  
  043c274e
- Add release stage to CI configuration and implement release job · 8b61f980
  rost authored 3 months ago
  
  8b61f980
- Add Docker tag command to CI configuration before pushing images · 0516290f
  rost authored 3 months ago
  
  0516290f
- Update CI configuration to use CONTAINER_LATEST_IMAGE and streamline push logic · 2b85530a
  rost authored 3 months ago
  
  2b85530a