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collections of hackyhour examples and documentation

Scripts written for the paper: "Asymmetric neurogenic commitment of retinal progenitors involves Notch through the endocytic pathway"

Exact stochastic simulation of intracellular transport

PPM client for diffusion in complex spaces

PDE inference from limited spatio-temporal data

A Python library for reducing differential equations and dynamical systems.

MSS trajectory analysis

Complementary information concerning the article "Evolution and cell-type specificity of human-specific genes preferentially expressed in progenitors of fetal neocortex"

This is a code-repository for the image-, sequencing and data-analysis performed for the manuscript: Integrated Molecular-Phenotypic Profiling Reveals Tuneable Modulators of Morphological Variation in Stembryos" authored by: Alba Villaronga Luque et al.

Repository containing the scripts used in Iglesias-Artola et al 2024. Quantitative imaging of species-specific lipid transport in mammalian cells

Supplementary Jupyter notebook to our article "Lgr5+ stem/progenitor cells reside at the apex of the embryonic hepatoblast pool"

Complementary information to the image analysis script described in the paper "Salamander Eci: an optical clearing protocol for the three-dimensional exploration of regeneration".