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Jenkins pipelines

This repository contains the image analysis pipelines for bile canaliculi analysis and mesenchyme counting associated with the paper "Mouse liver assembloids model periportal architecture and biliary fibrosis"

Library implementing TIGHT-CUT heuristic for solving FASP (Feedback Arc Set Problem)

MosaicSuite is a software for ImageJ/Fiji with image-processing algorithms developed at the MOSAIC group.

PICNIC (Proteins Involved in CoNdensates In Cells) is machine learning-based model that predicts proteins involved in biomolecular condensates.

Backend APIs (Flask) exposing data from database in RESTful format