Explore projects

Analysis of actomyosin dynamics at local and tissue scales in cultured Drosophila egg chambers. Ivana Viktorinová, Robert Haase, Tobias Pietzsch, Ian Henry and Pavel Tomancak

hidra fork, intended to exist until desy's hidra goes full open source on github or similar

Plugin to fit and unwrap ellipsoid surfaces

PDE inference from limited spatio-temporal data

openfpm_pdata

Complementary information to the Progenitors Processes Analysis (PPA) script described in the paper "Kalebic et al, Neocortical expansion due to increased proliferation of basal progenitors is linked to changes in their morphology".

Implementation of 2D unet. Use as base for user projects.

this repository contains Fiji scripts associated with the paper : Stefan et al., Quantitative analysis of native lipid dynamics and lipid protein interactions in living cells

Matlab toolbox and a tutorial on trajectory segmentation

Little tiny model of Ath5-Ptf1a interactions in fate decisions in the embryonic zebrafish retina.

Generate MFQL files automagically

Henricks script as Python