Explore projects
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rhaase / lecture_working_with_pixels
BSD 3-Clause "New" or "Revised" LicenseUpdated -
rhaase / lecture_multiview_registration
BSD 3-Clause "New" or "Revised" LicenseUpdated -
steinbac / gearshifft_deprecated
Apache License 2.0Updated -
Scientific Computing / Subiran Adrados et al 2020. Salamander Eci - an optical clearing protocol for the three-dimensional exploration of regeneration
BSD 3-Clause "New" or "Revised" LicenseComplementary information to the image analysis script described in the paper "Salamander Eci: an optical clearing protocol for the three-dimensional exploration of regeneration".
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patches to vfb-run to allow multiple xvfb processes on one machine
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kramer / cycle-coalescence-algorithm
MIT LicenseThis is a python implementation of the cycle coalescence algorithm as described by Modes et al, 2016.
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rhaase / NEUBIAS_TS13
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
Variant Effect Predictor (VEP) for missense variants in clinically actionable genes (ACMG SF v2.0).
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walker / cellpose_explore
BSD 3-Clause "New" or "Revised" LicenseExploring cellpose (deep learning) for segmentation in 2D&3D. Including setup for GPU on cluster or workstation
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rhaase / lecture_working_with_objects_in_2D_and_3D
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Particle filter tracking toolkit/framework for the popular free image processing software ImageJ.
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Basic code to perform inPhase, a method to determine dilute and condensed phase concentrations of protein condensates.
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Analysis of ARE in liver tissue. with Julien Delpierre
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Simulation of virus transmission between cells
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krishna / WDeversion_theory
MIT LicenseTheory analysis and code for studying Drosophila wing disc eversion
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